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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923198.1_cds_XP_016471885.1_64174
CDS Infomation

[gene=LOC107793944] [db_xref=GeneID:107793944] [protein=alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like] [protein_id=XP_016471885.1] [location=join(14336..14377,15231..15612,15804..15901,16142..16530,17328..17442,17576..17677,18128..18278,19511..19599,23699..23747,24339..24439,25267..25454,25696..25813,27166..27342,27411..27533,27614..27701,27809..27939,28015..28113,32165..32569)] [gbkey=CDS]
Sequence

ATGGAGTCGATTGAAGATACCCGCATTCCTCAGAACAATTTGATCCTACAAACGCCTGGA
ATCAAGTATAATGGTGTTCCATCTAGATTGGAAAGGCTATTAAGAGAAAGGGAACTACGA
AAATCCAGCAAGTCTCTATATGCAAATGAAGGCATAAGAGATGGCTACAGAGACTCAGAT
GTTTCTGTAAATGGAATTGAACTCTGTCTATCAGATGGCGATAAGAGAACTCGAGATGAA
GAGCTTATTGAAGGACTTGTAGCTGCAAAAACCCTTTCTGATGGCTCTGAGAGGCTAGAT
GGACGACCACAAAAGCAAAGATTGTTGGTTGTGGCAAATCGGTTGCCTGTTTCTGCTGTT
AGGAAAGGCAAAGATTCATGGGCTCTAGAAGTTAGTGTAGGAGGTTTAGTTCGAGCGCTG
TTGGGTGTCAATGAGTTTGAAGCAAATTGGATCGGGTGGGCTGGGGTGAATGTACCTGAT
GAAATTGGTCAGAGATCACTTACTGAAGCTCTAGCTGAAAAGAGGTGCATTCCAGTTTTT
CTTGATCAAGAAACTGTTCACCAATATTACAACGGCTATTGTAATAACATTCTATGGCCT
CTTTTCCATTATCTCCCACTTCCGCAAGAAGACCGTCTTGCAACCACCCGTAGCTTCCAG
TCCCAGTTTGCTGCATACAAGAAGGCAAACCAGATGTTTGCTGATGTCATCAATGAGCAT
TATCAAGAGGGTGATGTCGTCTGGTGCCATGATTACCACCTGATGTTTCTACCAAAATGC
CTTAAAGAGTATAATAGTAAAATGAAAGTTGGTTGGTTTCTTCACACACCTTTTCCTTCA
TCCGAAATTCATAGGACATTGCCATCTCGATCAGAGCTGTTAAGAGCAGTTCTTGCTGCT
GATTTAGTTGGCTTCCACACTTACGATTATGCAAGGCATTTTGTTAGTGCTTGCACTCGC
ATTCTTGGGCTTGAGGGCACACCTGAAGGAGTGGAGGACCAAGGAAAGCTGACACGTGTT
GCTGCGTTTCCTATCGGGATAGATTCTGATCGGTTCATTAGAGCTCTTGAGCTTTCTCCA
GTCAAGTACCATATCAAAGAACTGCAAGAAAGATTTGCTGGCAGAAAGGTAATGCTGGGC
ATAGACCGTCTGGATATGATTAAGGGAATCCCCCAAAGAATATTGGCATTTGAGAAGTTC
CTCGAAGAGAACCCAGACTGGCGTGACAAGGTAGTTTTGCTACAAATTGCAGTGCCAACC
AGGACAGATGTCCCCGAGTATCAAAAACTTACGTGCCAAGTACATGAAATTGTGGGACGC
ATCAATGGAAGATTTGGAACTCTAACAGCTGTCCCGATCCATCATTTGGACCGCTCTCTT
GATTTTCATGCACTGTGCGCAATTTATGCTGTCACTGATGTTGCTCTAGTTACATCCCTA
AGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTGGCCTGCCAAGCATCCAAGAAAGGA
GTCCTAATTCTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGGGCTATTTTG
GTGAACCCGTGGAATGTTACAGAACTTGCGTCCTCTATTGGTTATGCTCTAACAATGTCT
GCCCATGAAAGAGAAAAACGACATCACCATAACTTCATGCATGTCACTACTCACACTTCC
CAGGAATGGGCTGAAACATTTGTAAGCGAACTCAATGATACAGTTGTTGAAGCTCAACTG
AGGACTAGACAAATTCCGCCTCAGCTACCTACCAAATTGGCTATCGAGCGCTACTTGCGA
TCAAATAATCGGTTGCTTATATTGGGTTTCAATGCCACATTAACAGAGCCAGTGGACGCC
CAGGGAAGAAGGATTGATCAACTAAAAGAAATGGAGCTTAAGTTGCATCCAGATTTAAAA
GAACCTTTAAGAAAGCTCTGTAATGACCCAAAAACGACAGTAGTTGTCCTCAGTGGAAGT
GACCGGAATGTTCTTGATGAGAATTTTGGAGAATATAGGATGTGGTTGGCTGCTGAACAT
GGAATGTTTTTGCGACAAACAGAGGGGAATTGGATGACTACGATGCCTGAAAATCTAAAT
ATGGATTGGGTTGACAGCGTGAAGCATGTATTTGAGTATTTCACTGAGAGGACCCCTCGT
TCTCATTTTGAGCTTCGTGAGACCTCACTTGTTTGGAACTATAAATATACAGATATCGAG
TTTGGAAGACTTCAATCAAAAGATCTCTTGCAACATTTGTGGACAGGCCCAATTTCAAAT
GCTTCTGTAGATGTAGTCCAGGGTAGTCGATCCGTTGAGGTTCGAGCAGTTGGTGTTACT
AAGGGGGCAGCAATTGATCGTATTTTGGGAGAAATAGTGCATAACAATGATGTCAAGGCA
CCAATAGATTATGTTTTATGCATAGGGCACTTTCTGCCAAAGGATGAAGATATTTATTCA
TTTTTTGAGCCAGAGCTTCCTCTTGGACAAGCAGCAACTACAAGAAACAAGATAGCTAAC
CATCTCAATAGAAATACTTCAAATCATTCAGCTGGTAAAAGCGGGCACCGGGCAGTTAGT
TACAAAGTTTCCCAGCAAGCTTCAACCTTAGACAAGAAAGCTGGCAGTAATGAAAATGGA
AATTGGTGGTCCATGATGCGTGATAGAATGACAGTTCATGAAGGGTCATCGGTTCTTGAC
CTCAAGGCTGATAACTACTTCTCTTGTGCAGTTGGTAGAAAGTGCTCTACTTCCAGATAC
CTTCTTGGTTCATCAGCTGATGTTGTGTCCCTATTGAAAGAGCTGGCCTACTGTTCATCT
TACAGAGCTGCTTCTTCATACAAATAG

Peptide Sequence

PEP ID

XP_016471885.1
PEP Infomation

PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like [Nicotiana tabacum]
Sequence

MESIEDTRIPQNNLILQTPGIKYNGVPSRLERLLRERELRKSSKSLYANEGIRDGYRDSD
VSVNGIELCLSDGDKRTRDEELIEGLVAAKTLSDGSERLDGRPQKQRLLVVANRLPVSAV
RKGKDSWALEVSVGGLVRALLGVNEFEANWIGWAGVNVPDEIGQRSLTEALAEKRCIPVF
LDQETVHQYYNGYCNNILWPLFHYLPLPQEDRLATTRSFQSQFAAYKKANQMFADVINEH
YQEGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAA
DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELSP
VKYHIKELQERFAGRKVMLGIDRLDMIKGIPQRILAFEKFLEENPDWRDKVVLLQIAVPT
RTDVPEYQKLTCQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCAIYAVTDVALVTSL
RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNVTELASSIGYALTMS
AHEREKRHHHNFMHVTTHTSQEWAETFVSELNDTVVEAQLRTRQIPPQLPTKLAIERYLR
SNNRLLILGFNATLTEPVDAQGRRIDQLKEMELKLHPDLKEPLRKLCNDPKTTVVVLSGS
DRNVLDENFGEYRMWLAAEHGMFLRQTEGNWMTTMPENLNMDWVDSVKHVFEYFTERTPR
SHFELRETSLVWNYKYTDIEFGRLQSKDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVT
KGAAIDRILGEIVHNNDVKAPIDYVLCIGHFLPKDEDIYSFFEPELPLGQAATTRNKIAN
HLNRNTSNHSAGKSGHRAVSYKVSQQASTLDKKAGSNENGNWWSMMRDRMTVHEGSSVLD
LKADNYFSCAVGRKCSTSRYLLGSSADVVSLLKELAYCSSYRAASSYK

Transcript Sequence

Gene sequence data has not been registered.